Nationality: French
Date of birth: 06/20/1979

Current employment

Research and Development Manager in real time embedded system for color analysis and fast image processing at Newtone Technologies (Lyon).

Current projects

- Image processing embedded system for fast color analysis and pattern recognition (Newtone Technologies)
- Pipeline automation: New tool for creating pipeline and run then automatically. The pipeline is multithreaded and can be distributed.
- ITK (www.itk.org, NLM Insight tool kit) image processing algorithm development. Added compression for GIPL images and add new features for the GE image reader.
- Head circumference tool based on MRI data.
- Diffusion Tensor Imaging fiber tracts analysis: 'Fiber Viewer' is a new tool to analyse fiber tracts between patient.
- Creation of a new tool to check the quality of Diffusion Tensor Images.
- Brain warping using Sarang Joshi's algorithm. Creation of average warped images based on different subjects.

Education

1998-2002: ESCPE (University of Chemistry, Physics and Electronics), Lyon, France. Engineering Degree in Electronics and Signal Processing.
1996-1998: ESCPE preparatory classes. Preparation for national competitive entrance exams to the French 'Grandes Écoles'.


Professional experience

2005 - Present: Newtone Technologies: Research and Development manager in real time embedded system for color analysis and fast image processing.
2003 - 2005: University of North Carolina at Chapel Hill: Senior Software Engineer for the Neurodevelopmental Disorders Research Center.
2002 - 2003: Laboratory of Molecular and Ionic Spectroscopy at Lyon (France): Senior Software Engineer for image and data processing. Software development in C/C++ and Labview.
2001 - 2002: Delta Technologies at Toulouse (France): VHDL programmer for fast image processing on FPGA Altera FLEX 10K.
2000 - 2001: University of North Carolina at Chapel Hill: Medical Imagind and Display Analysis Lab: One year Internship. Software development for 3D surfaces comparison. 'Valmet' is now used for comparing structural segmentations between patients.
June 2000: Project leader. Conception and realization of a CCD camera from a TH7852 matrix and microcontroller 68HC11.

Publications

1. Sarang Joshi, Brad Davis, Matthieu Jomier, Guido Gerig, "Unbiased Diffeomorphic Atlas Construction for Computational Anatomy", In print, NeuroImage, to appear August 2004.
2. G. Gerig, M. Jomier and M. Chakos, VALMET: A new validation tool for assessing and improving 3D object segmentation, Proc. MICCAI2001, Proc. MICCAI 2001, Springer LNCS 2208, pp. 516-523
3. M Styner, M Jomier, D.W. Jones, D Weinberger, JA Lieberman, G Gerig, Shape analysis of ventricular structures in mono and dizygotic twin study, Schizophrenia Research, Vol. 49, April 28, 2001, p. 167
4. G Gerig, M Jomier, M Chakos, JA Lieberman, Segmentation of hippocampal shape: Improved reliability by 2D and 3D visualization of segmented objects and of intra-/inter-rater variability. Schizophrenia Research, Vol. 49, Nos. 1-2, Elsevier, April 28, 2001, p. 154.

Software

· Intensity Rescaler: Automatic intensity calibration tool based on White, Gray and CSF maps.
· Head Circumference: Circumference tool base on Fourier harmonics for MRI data.
· Mri Watcher: Multi images viewer for comparing MRI data.
· Valmet: 2D and 3D segmentations comparison tool.
· Medivisit: Database for medical visitor contacts and drugs prescription analysis.
· Code And Chat Utility System (CACTUS): Chat system with code sharing.
· Imagine: Graphical Development Tool for Fast Image Processing Development
. PHP Project Manager: PhP-based software for project management.
. PHP Movie Manager: PhP-based software for movie management and rating.


Languages

French: Native language
English: Fluent
Spanish: Basic


Skills

Computing: C++, C, Visual C++ Embedded, MPI, MFC, Pascal, VB, Delphi
Networking: PhP, ASP, Perl, Html, MySQL
Image Processing: ITK, VTK, OpenGL, Matlab, Qt, FLTK


Hobbies

Sports: Volley Ball (Regional team during 8 years), tennis, swimming, ski.
Astronomy: Member of the astronomy club in Auxerre (France)
Music: Piano and guitar player in a band during 8 years.
Graphics: Digital drawing and website designing.

Updated on June 2004